BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003D07SP1|AL425116
(1008 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1596 1975 0.0
>3x_Contig1596
Length = 11686
Score = 1975 bits (995), Expect = 0.0
Identities = 1003/1005 (99%), Gaps = 1/1005 (0%)
Strand = Plus / Minus
Query: 1 atccgcaccacctgnttactagacagttaccttctttgttaaaagttatkgaatagatag 60
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2849 atccgcaccacctg-ttactagacagttaccttctttgttaaaagttatggaatagatag 2791
Query: 61 gattcttaccgtgacccttcatctgtttgattcttttaccagtaccaatatcccatacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2790 gattcttaccgtgacccttcatctgtttgattcttttaccagtaccaatatcccatacga 2731
Query: 121 taattgtgccatcctcactgcccgtagttaaccacctaccgtcaggcgatacttcaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2730 taattgtgccatcctcactgcccgtagttaaccacctaccgtcaggcgatacttcaagtg 2671
Query: 181 cggtgactggtgatgtatgtcccaaaaacagtctaacagaatcacctgtttgaatatccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2670 cggtgactggtgatgtatgtcccaaaaacagtctaacagaatcacctgtttgaatatccc 2611
Query: 241 acatacggcacgttttgtcgctggaaccagtgaaaacatagcaaccatttggatggaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2610 acatacggcacgttttgtcgctggaaccagtgaaaacatagcaaccatttggatggaaag 2551
Query: 301 tgctacaatccacgtcatttagatgacctgagaaaattctcaacggatagatatgatcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2550 tgctacaatccacgtcatttagatgacctgagaaaattctcaacggatagatatgatcac 2491
Query: 361 aagaccatagtctagccgtttgatcatgtgaagcggtgatgaaataatggccaagtggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2490 aagaccatagtctagccgtttgatcatgtgaagcggtgatgaaataatggccaagtggag 2431
Query: 421 aaaacttgacgtaccatactggatggttatggcctttgtaacacactaggcaagtgaacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2430 aaaacttgacgtaccatactggatggttatggcctttgtaacacactaggcaagtgaacg 2371
Query: 481 tatctaaagaccaaagtctgacagttttatcttcagatgcgctaagtaagtacctgttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2370 tatctaaagaccaaagtctgacagttttatcttcagatgcgctaagtaagtacctgttat 2311
Query: 541 ccgggctgaatgcaacggaataaactggtccgctgtgtcctaccaaagtagcagagttcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2310 ccgggctgaatgcaacggaataaactggtccgctgtgtcctaccaaagtagcagagttcg 2251
Query: 601 attggtctttagctttggatgggaggatcgactgtagcggtgatccatcaaggtaccata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2250 attggtctttagctttggatgggaggatcgactgtagcggtgatccatcaaggtaccata 2191
Query: 661 ccttaattgtactgtcttggaaaccagctgcagttagtctagcatcatcactaaattcta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2190 ccttaattgtactgtcttggaaaccagctgcagttagtctagcatcatcactaaattcta 2131
Query: 721 cgcaagtcatattaccattagtgttgtggaaagtgtacatacacacacttggtgcagaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2130 cgcaagtcatattaccattagtgttgtggaaagtgtacatacacacacttggtgcagaag 2071
Query: 781 tttgtaggtttttcaattggatggaatctctactctcccttactttttgaatttccatct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2070 tttgtaggtttttcaattggatggaatctctactctcccttactttttgaatttccatct 2011
Query: 841 ttagatctaaagttgtttttaccggtagcggcaacgaatcctttgctggtgattccatca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2010 ttagatctaaagttgtttttaccggtagcggcaacgaatcctttgctggtgattccatca 1951
Query: 901 tagatccaattgaagcctctggtttttcttcctcgtctttattctttgagtctcttttct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1950 tagatccaattgaagcctctggtttttcttcctcgtctttattctttgagtctcttttct 1891
Query: 961 ttctttcagcagccgatgattcgacactaagtgtaggagtgcctt 1005
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1890 ttctttcagcagccgatgattcgacactaagtgtaggagtgcctt 1846
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6660
Number of Sequences: 1807
Number of extensions: 6660
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 1008
length of database: 10,358,551
effective HSP length: 16
effective length of query: 992
effective length of database: 10,329,639
effective search space: 10247001888
effective search space used: 10247001888
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)